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2021 Publications

  1. Abramov A, Vishnivetskaya T, Rivkina E. 2021. Are permafrost microorganisms as old as permafrost? FEMS Microbiology Ecology 97:fiaa260.
  2. Bernard RF, Willcox EV, Jackson RT, Brown VA, McCracken GF. 2021.  Feasting, not fasting: winter diets of cave hibernating bats in the United States. Frontiers in Zoology 18:48.
  3. Catarino AI, Kramm J, Volker C, Henry TB, Everaert G. 2021. Risk posed by microplastics: Scientific evidence and public perception. Current Opinion in Green and Sustainable Chemistry 29:e100467.
  4. Chen J, Yang L, Chen X, Ripp S, Radosevich M, Zhuang J. 2021. Bacterial mobility facilitated by soil depth and intact structure. Soil and Tillage Research 209:104911.
  5. Choi M, Yun T, Song MJ, Kim J, Lee B-H, Löffler FE, Yoon S. 2021. Cometabolic vinyl chloride degradation at acidic pH catalyzed by acidophilic methanotrophs isolated from alpine peat bogs. Environmental Science & Technology doi:10.1021/acs.est.0c08766.
  6. Dai X, Wang Y, Luo L, Pfiffner SM, Li G, Dong Z, Xu Z, Dong H, Huang L. 2021. Detection of the deep biosphere in metamorphic rocks from the Chinese continental scientific drilling. Geobiology doi: 10.1111/gbi.12430.
  7. Din G, Hassan A, Dunlap J, Ripp S, Hasan F, Shah AA. 2021. Cadmium tolerance and bioremediation potential of filamentous fungus Penicillium chrysogenum FMS2 isolated from soil. International Journal of Environmental Science and Technology 10.1007/s13762-021-03211-7.
  8. Goñez-Rodríguez L, Johs A, Lowe KA, Carter KE, Löffler FE, Mayes MA. 2021. Evaluation of engineered sorbents for the sorption of mercury from contaminated bank soils: A column study. Environmental Science and Pollution Research 10.1007/s11356-020-12073-4.
  9. Karthikeyan S, Orellana LH, Johnston ER, Hatt JK, Löffler FE, Ayala-del-Río HL, González G, Konstantinidis KT. 2021. Metagenomic characterization of soil microbial communities in the Luquillo experimental forest (Puerto Rico) and implications for nitrogen cycling. Applied and Environmental Microbiology doi:10.1128/aem.00546-21:AEM.00546-21.
  10. Liang RX, Li Z, Vetter M, Vishnivetskaya TA, Zanina OG, Lloyd KG, Pfiffner SM, Rivkina EM, Wang W, Wiggins J, Miller J, Hettich RL, Onstott TC. 2021. Genomic reconstruction of fossil and living microorganisms in ancient Siberian permafrost. Microbiome 9:e110.
  11. Mendrik FM, Henry TB, Burdett H, Hackney CR, Waller C, Parsons DR, Hennige SJ. 2021. Species-specific impact of microplastics on coral physiology. Environmental Pollution 269.
  12. Millet LJ, Giannone RJ, Greenwood MS, Foster CM, O’Neil KM, Braatz AD, Davern SM. 2021. Identifying candidate biomarkers of ionizing radiation in human pulmonary microvascular lumens using microfluidics – A pilot study. Micromachines 12:904.
  13. Noubissi FK, McBride AA, Leppert HG, Millet LJ, Wang X, Davern SM. 2021. Detection and quantification of γ-H2AX using a dissociation enhanced lanthanide fluorescence immunoassay. Scientific Reports 11:8945.
  14. Sanford RA, Lloyd KG, Konstantinidis KT, Loffler FE. 2021. Microbial taxonomy run amok. Trends in Microbiology 29:394-404.
  15. Shan J, Sanford RA, Chee-Sanford J, Ooi SK, Loffler FE, Konstantinidis KT, Yang WH. 2021. Beyond denitrification: The role of microbial diversity in controlling nitrous oxide reduction and soil nitrous oxide emissions. Global Change Biology doi:10.1111/gcb.15545.
  16. Shmakova L, Malavin S, Iakovenko N, Vishnivetskaya T, Shain D, Plewka M, Rivkina E. 2021. A living bdelloid rotifer from 24,000-year-old Arctic permafrost. Current Biology 31:R712-R713.
  17. Shobnam N, Sun YC, Mahmood M, Loffler FE, Im J. 2021. Biologically mediated abiotic degradation (BMAD) of bisphenol A by manganese-oxidizing bacteria. Journal of Hazardous Materials 417.
  18. Sipes K, Almatari AL, Eddie A, Williams D, Spirina E, Rivkina E, Liang R, Onstott TC, Vishnivetskaya T, Lloyd KG. Eight metagenome-assembled genomes provide evidence for microbial adaptation in 20,000 to 1,000,000-year-old Siberian permafrost. Applied and Environmental Microbiology. DOI: 10.1128/AEM.00972-21, in press.
  19. St Mary L, Trine LSD, Roper C, Wiley J, Simonich SLM, McCoustra M, Henry TB. 2021. Time-related alteration of aqueous-phase anthracene and phenanthrene photoproducts in the presence of TiO2 nanoparticles. Environmental Science & Technology 55:3727-3735.
  20. Wu X, Chauhan A, Layton AC, Lau Vetter MCY, Stackhouse BT, Williams DE, Whyte L, Pfiffner SM, Onstott TC, Vishnivetskaya TA. Comparative metagenomics of the active layer and permafrost from low carbon soil in the Canadian High Arctic. Environmental Science and Technology, in press.
  21. Xu T, Gilliam M, Sayler G, Ripp S, Close D. 2021. Screening for androgen agonists using autonomously bioluminescent HEK293 reporter cells. Biotechniques 71:10.2144/btn-2021-0017.
  22. Yan J, Wang J, Villalobos Solis MI, Jin H, Chourey K, Li X, Yang Y, Yin Y, Hettich RL, Löffler FE. 2021. Respiratory vinyl chloride reductive dechlorination to ethene in tceA-expressing Dehalococcoides mccartyi. Environmental Science & Technology doi:10.1021/acs.est.0c07354.
  23. Yang Y, Huo LT, Li XY, Yan J, Loffler FE. 2021. Complete genome sequence of Sulfurospirillum sp. strain ACSDCE, an anaerobic bacterium that respires tetrachloroethene under acidic pH conditions. Microbiology Resource Announcements 10.
  24. Yang L, Kang J, Chen X, Ripp S, Zhuang J. 2021. Real-time bioluminescent imaging of spatiotemporal variation of microbial retention during transport through porous media under variably saturated flow conditions. Journal of Hydrology 601:126603.
  25. Zanina OG, Lopatina DA, Hovsepyan YS, Kuzmina SA, Stepanova AY, Taldenkova EE, Vishnivetskaya TA, Rivkina EM. Reconstruction of the conditions for the development of the natural environment at Cape Maly Chukochiy in the Pleistocene according to micropaleontological analysis. Stratigraphy and Geological Correlation, in press.
  26. Zhuang J, Löffler F, Sayler G, Yu G, Jiang G. 2021. Solving shared problems at the food, energy, and water nexus. EOS, Transactions American Geophysical Union 102,
  27. Zhuang J, Sun HH, Sayler G, Kline KL, Dale VH, Jin MZ, Yu GR, Fu BJ, Loffler FE. 2021. Food-Energy-Water crises in the United States and China: Commonalities and asynchronous experiences support integration of global efforts. Environmental Science & Technology 55:1446-1455.