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2017 Publications

  1. Aguirre-Martinez GV, Reinardy HC, Martin-Diaz ML, Henry TB. 2017. Response of gene expression in zebrafish exposed to pharmaceutical mixtures: Implications for environmental risk. Ecotoxicology and Environmental Safety 142:471-479.
  2. Akondi RN, Trexler RV, Sharma S, Pfiffner SM, Mouser PJ. 2017. Optimized lipid extraction methods for deep subsurface shale. Frontiers in Microbiology 8:e1408.
  3. Brown VA, Willcox EV, Fagan KE, Bernard RF. 2017. Identification of southeastern bat species using non-invasive genetic sampling of individual guano pellets. Journal of Fish and Wildlife Management 8:632-639.
  4. Catarino AI, Thompson R, Sanderson W, Henry TB. 2017. Development and optimization of a standard method for extraction of microplastics in mussels by enzyme digestion of soft tissues. Environmental Toxicology and Chemistry 36:947-951.
  5. Chen G, Kleindienst S, Griffiths DR, Mack EE, Seger ES, Loffler FE. 2017. Mutualistic interaction between dichloromethane- and chloromethane-degrading bacteria in an anaerobic mixed culture. Environmental Microbiology 19:4784-4796.
  6. Chen G, Murdoch RW, Mack EE, Seger ES, Loffler FE. 2017. Complete genome sequence of Dehalobacterium formicoaceticum strain DMC, a strictly anaerobic dichloromethane-degrading bacterium. Microbiology Resource Announcements 5.
  7. Choi J, Klingeman DM, Brown SD, Cox CD. 2017. The LacI family protein GlyR3 co-regulates the celC operon and manB in Clostridium thermocellum. Biotechnology for Biofuels 10.
  8. Chowdhary J, Loffler FE, Smith JC. 2017. Community detection in sequence similarity networks based on attribute clustering. PLoS ONE 12.
  9. Cravens ZM, Brown VA, Divoll TJ, Boyles JG. 2017. Illuminating prey selection in an insectivorous bat community, exposed to artificial light at night. Journal of Applied Ecology 10.1111/1365-2664.13036.
  10. Hasim S, Vaughn EN, Donohoe D, Gordon DM, Pfiffner S, Reynolds TB. 2017. Influence of phosphatidylserine and phosphatidylethanolamine on farnesol tolerance in Candida albicans. Yeast, doi: 10.1002/yea.3297.
  11. Henry TB, Marioni-Henry K. 2017. Author gender and career progression in Environmental Science & Technology. Environmental Science & Technology 51:9417-9418.
  12. John BA, Xu T, Ripp S, Wang H-CR. 2017. A real-time non-invasive auto-bioluminescent urinary bladder cancer xenograft model. Molecular Imaging and Biology doi 10.1007/s11307-016-0989-y.
  13. Kleindienst S, Higgins SA, Tsementzi D, Chen G, Konstantinidis KT, Mack EE, Loffler FE. 2017. ‘Candidatus Dichloromethanomonas elyunquensis’ gen. nov., sp nov., a dichloromethane-degrading anaerobe of the Peptococcaceae family. Systematic and Applied Microbiology 40:150-159.
  14. Meyers A, Chourey K, Weiskittel TM, Pfiffner S, Dunlap JR, Hettich RL, Dalhaimer P. 2017. The protein and neutral lipid composition of lipid droplets isolated from the fission yeast, Schizosaccharomyces pombe. Journal of Microbiology 55:112-122.
  15. Qin Q, Chen XJ, Zhuang J. 2017. The surface-pore integrated effect of soil organic matter on retention and transport of pharmaceuticals and personal care products in soils. Science of the Total Environment 599:42-49.
  16. Simsir B, Yan J, Im J, Graves D, Loffler FE. 2017. Natural attenuation in streambed sediment receiving chlorinated solvents from underlying fracture networks. Environmental Science & Technology 51:4821-4830.
  17. Sleight VA, Bakir A, Thompson RC, Henry TB. 2017. Assessment of microplastic-sorbed contaminant bioavailability through analysis of biomarker gene expression in larval zebrafish. Marine Pollution Bulletin 116:291-297.
  18. Stackhouse B, Lau MCY, Vishnivetskaya T, Burton N, Wang R, Southworth A, Whyte L, Onstott TC. 2017. Atmospheric CH4 oxidation by Arctic permafrost and mineral cryosols as a function of water saturation and temperature. Geobiology 15:94-111.
  19. Techtman SM, Mahmoudi N, Whitt KT, Campa MF, Fortney JL, Joyner DC, Hazen TC. 2017. Comparison of Thaumarchaeotal populations from four deep sea basins. FEMS Microbiology Ecology 93.
  20. Techtmann SM, Zhuang MB, Campo P, Holder E, Elk M, Hazen TC, Conmy R, Domingo JWS. 2017. Corexit 9500 enhances oil biodegradation and changes active bacterial community structure of oil-enriched microcosms. Applied and Environmental Microbiology 83.
  21. Vulava VM, Vaughn DS, McKay LD, Driese SG, Cooper LW, Menn FM, Levine NS, Sayler GS. 2017. Flood-induced transport of PAHs from streambed coal tar deposits. Science of the Total Environment 575:247-257.
  22. Wang PH, Tang SQ, Nemr K, Flick R, Yan J, Mahadevan R, Yakunin AF, Loffler FE, Edwards EA. 2017. Refined experimental annotation reveals conserved corrinoid autotrophy in chloroform-respiring Dehalobacter isolates. ISME Journal 11:626-640.
  23. Xu T, Conway M, Frank A, Ripp S, Sayler G, Close D. 2017. Co-cultured continuously bioluminescent human cells as bioreporters for the detection of prodrug therapeutic impact pre- and post-metabolism. Sensors 17:e2827.
  24. Yan J, Bi M, Bourdon AK, Farmer AT, Wang P-H, Molenda O, Quaile AT, Jiang N, Yang Y, Yin Y, Şimşir B, Campagna SR, Edwards EA, Löffler FE. 2017. Purinyl-cobamide is a native prosthetic group of reductive dehalogenases. Nature Chemical Biology, 10.1038/nchembio.2512.
  25. Yang Y, Capiro NL, Marcet TF, Yan J, Pennell KD, Loffler FE. 2017. Organohalide respiration with chlorinated ethenes under low pH conditions. Environmental Science & Technology 51:8579-8588.
  26. Yang Y, Capiro NL, Yan J, Marcet TF, Pennell KD, Loffler FE. 2017. Resilience and recovery of Dehalococcoides mccartyi following low pH exposure. FEMS Microbiology Ecology 93.
  27. Yang Y, Higgins SA, Yan J, Simsir B, Chourey K, Iyer R, Hettich RL, Baldwin B, Ogles DM, Loffler FE. 2017. Grape pomace compost harbors organohalide-respiring Dehalogenimonas species with novel reductive dehalogenase genes. ISME Journal 10.1038/ismej.2017.127.